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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
Assay category
DNA accessibility
13
DNA binding
Target of assay
8
histone
8
histone modification
5
narrow histone mark
3
broad histone mark
3
transcription factor
2
RNA binding protein
2
control
Date released
4
August, 2021
4
November, 2017
3
May, 2021
2
October, 2019
Available data
275
bam
249
bigWig
225
fastq
155
tsv
97
bed narrowPeak
41
zippedFastqFolder
36
bigBed narrowPeak
7
tagAlign
6
bed bedMethyl
6
bed broadPeak
6
bigBed bedMethyl
6
bigBed broadPeak
6
hic
5
bed bed3+
5
bedpe bed3+
3
cool
2
hdf5
Organism
13
Homo sapiens
Biosample type
10
primary cell
3
in vitro differentiated cells
Organ
133
liver
124
brain
22
connective tissue
19
pancreas
15
musculature of body
13
epithelium
12
vasculature
10
blood vessel
8
adipose tissue
6
artery
6
heart
2
vein
1
pituitary gland
Project
13
AMP
Genome assembly (visualization)
11
hg19
9
GRCh38
Lab
13
AMP-T2D consortium
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
primary cell
hepatocyte
4
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell of umbilical vein
2
in vitro differentiated cells
pancreatic PP cell
3
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