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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
22
ATAC-seq
17
DNase-seq
1
FAIRE-seq
Assay category
40
DNA accessibility
38
DNA binding
Target of assay
31
histone
31
histone modification
16
broad histone mark
15
narrow histone mark
7
RNA binding protein
7
transcription factor
1
chromatin remodeller
Date released
18
June, 2019
16
October, 2019
14
December, 2017
14
September, 2018
5
September, 2017
4
May, 2019
4
November, 2017
3
August, 2017
Available data
317
bam
301
bigWig
257
fastq
156
tsv
151
bed narrowPeak
80
zippedFastqFolder
76
bigBed narrowPeak
22
bed broadPeak
22
bigBed broadPeak
21
bed bed3+
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
78
Homo sapiens
Biosample type
63
primary cell
14
in vitro differentiated cells
1
cell line
Organ
364
liver
128
brain
104
kidney
99
pancreas
94
heart
85
vasculature
84
limb
81
blood vessel
78
epithelium
60
musculature of body
54
blood
54
bodily fluid
29
connective tissue
26
nerve
25
artery
18
ureter
15
vein
13
spleen
11
adipose tissue
6
eye
Project
78
AMP
Genome assembly (visualization)
75
GRCh38
72
hg19
Lab
78
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
78 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
12
2
1
pancreatic beta cell
7
pancreatic alpha cell
6
kidney epithelial cell
4
1
pancreatic acinar cell
5
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in vitro differentiated cells
hepatocyte
14
cell line
glomerular visceral epithelial cell
1
See all biosamples
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