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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
22
ATAC-seq
17
DNase-seq
1
FAIRE-seq
Assay category
40
DNA accessibility
34
DNA binding
Target of assay
29
histone
29
histone modification
16
broad histone mark
13
narrow histone mark
5
RNA binding protein
5
transcription factor
1
chromatin remodeller
Date released
18
June, 2019
16
October, 2019
14
December, 2017
14
September, 2018
5
September, 2017
4
May, 2019
November, 2017
3
August, 2017
Available data
311
bam
295
bigWig
251
fastq
156
tsv
147
bed narrowPeak
80
zippedFastqFolder
72
bigBed narrowPeak
21
bed bed3+
18
bed broadPeak
18
bigBed broadPeak
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
74
Homo sapiens
Biosample type
59
primary cell
14
in vitro differentiated cells
1
cell line
Organ
109
liver
104
kidney
99
pancreas
94
heart
84
limb
81
vasculature
79
blood vessel
74
epithelium
64
brain
60
musculature of body
54
blood
54
bodily fluid
29
connective tissue
26
nerve
25
artery
18
ureter
15
vein
13
spleen
11
adipose tissue
6
eye
Project
74
AMP
Genome assembly (visualization)
71
GRCh38
68
hg19
Lab
74
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
month_released!
November, 2017
BIOSAMPLE
ASSAY
74 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
12
2
1
pancreatic beta cell
7
pancreatic alpha cell
6
kidney epithelial cell
4
1
pancreatic acinar cell
5
+ See 12 more…
in vitro differentiated cells
hepatocyte
14
cell line
glomerular visceral epithelial cell
1
See all biosamples
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