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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
22
ATAC-seq
16
DNase-seq
1
FAIRE-seq
Assay category
39
DNA accessibility
24
DNA binding
Target of assay
19
histone
19
histone modification
10
narrow histone mark
9
broad histone mark
5
RNA binding protein
5
transcription factor
Date released
17
June, 2019
16
October, 2019
14
September, 2018
5
September, 2017
4
May, 2019
4
November, 2017
3
August, 2017
Available data
291
bam
277
bigWig
242
fastq
151
tsv
132
bed narrowPeak
80
zippedFastqFolder
61
bigBed narrowPeak
21
bed broadPeak
21
bigBed broadPeak
16
bed bed3+
6
hic
5
bed bedMethyl
5
bedpe bed3+
5
bigBed bedMethyl
3
cool
3
tagAlign
1
hdf5
1
tar
Organism
63
Homo sapiens
Biosample type
62
primary cell
1
cell line
Organ
liver
128
brain
104
kidney
99
pancreas
94
heart
85
vasculature
84
limb
81
blood vessel
78
epithelium
60
musculature of body
54
blood
54
bodily fluid
29
connective tissue
26
nerve
25
artery
18
ureter
15
vein
13
spleen
11
adipose tissue
6
eye
Project
63
AMP
Genome assembly (visualization)
60
GRCh38
57
hg19
Lab
63
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
63 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
12
2
1
pancreatic beta cell
7
pancreatic alpha cell
6
kidney epithelial cell
4
1
pancreatic acinar cell
5
+ See 11 more…
cell line
glomerular visceral epithelial cell
1
See all biosamples
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