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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ATAC-seq
22
ChIP-seq
17
DNase-seq
1
FAIRE-seq
Assay category
40
DNA accessibility
22
DNA binding
Target of assay
31
histone
31
histone modification
broad histone mark
15
narrow histone mark
7
RNA binding protein
7
transcription factor
1
chromatin remodeller
Date released
18
June, 2019
14
September, 2018
9
October, 2019
7
December, 2017
5
September, 2017
4
November, 2017
3
August, 2017
2
May, 2019
Available data
273
bam
259
bigWig
234
fastq
156
tsv
111
bed narrowPeak
80
zippedFastqFolder
62
bigBed narrowPeak
20
bed bed3+
20
bed broadPeak
20
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
6
tagAlign
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
62
Homo sapiens
Biosample type
54
primary cell
7
in vitro differentiated cells
1
cell line
Organ
342
liver
92
kidney
70
brain
65
pancreas
62
epithelium
60
heart
54
blood
54
bodily fluid
50
limb
44
musculature of body
42
vasculature
38
blood vessel
25
connective tissue
18
ureter
11
adipose tissue
11
artery
10
nerve
9
spleen
8
vein
6
eye
Project
62
AMP
Genome assembly (visualization)
61
GRCh38
56
hg19
Lab
62
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
62 results
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Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
5
2
1
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
+ See 12 more…
in vitro differentiated cells
hepatocyte
7
cell line
glomerular visceral epithelial cell
1
See all biosamples
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