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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
DNase-seq
4
ChIP-seq
Assay category
16
DNA accessibility
4
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
14
June, 2019
4
November, 2017
2
October, 2019
Available data
273
bam
259
bigWig
234
fastq
156
tsv
111
bed narrowPeak
80
zippedFastqFolder
62
bigBed narrowPeak
20
bed bed3+
20
bed broadPeak
20
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
6
tagAlign
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
20
Homo sapiens
Biosample type
20
primary cell
Organ
78
kidney
55
liver
43
brain
38
musculature of body
36
limb
30
heart
20
epithelium
18
ureter
15
vasculature
13
pancreas
11
blood vessel
10
connective tissue
4
artery
4
eye
3
adipose tissue
2
nerve
2
vein
1
spleen
Project
20
AMP
Genome assembly (visualization)
20
GRCh38
14
hg19
Lab
20
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
20 results
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DNase-seq
ChIP-seq
primary cell
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
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