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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
DNase-seq
4
ChIP-seq
Assay category
20
DNA accessibility
4
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
16
June, 2019
4
November, 2017
4
October, 2019
Available data
360
bam
329
bigWig
234
fastq
213
tsv
171
bed narrowPeak
80
zippedFastqFolder
73
bigBed narrowPeak
24
bed bed3+
24
bed broadPeak
24
bigBed broadPeak
12
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
24
Homo sapiens
Biosample type
20
primary cell
4
tissue
Organ
78
kidney
55
liver
43
brain
38
musculature of body
36
limb
30
heart
20
epithelium
18
ureter
15
vasculature
13
pancreas
11
blood vessel
10
connective tissue
4
artery
4
eye
3
adipose tissue
2
nerve
2
vein
1
spleen
Project
24
AMP
Genome assembly (visualization)
24
GRCh38
18
hg19
Lab
24
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
24 results
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DNase-seq
ChIP-seq
primary cell
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
+ See 8 more…
tissue
coronary artery
2
tibial artery
2
See all biosamples
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