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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
6
DNase-seq
Assay category
6
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
4
June, 2019
4
November, 2017
4
October, 2019
Available data
284
bam
271
bigWig
257
fastq
148
tsv
128
bed narrowPeak
80
zippedFastqFolder
59
bigBed narrowPeak
12
bed broadPeak
12
bigBed broadPeak
11
bed bed3+
7
tagAlign
6
hic
5
bedpe bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
cool
2
hdf5
1
tar
Organism
12
Homo sapiens
Biosample type
12
primary cell
Organ
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
12
AMP
Genome assembly (visualization)
12
hg19
10
GRCh38
Lab
12
AMP-T2D consortium
organ_slims!
kidney
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
DNase-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
hepatocyte
1
retinal pigment epithelial cell
1
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