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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
Assay category
40
DNA accessibility
36
DNA binding
Target of assay
29
histone
29
histone modification
15
narrow histone mark
14
broad histone mark
7
RNA binding protein
7
transcription factor
1
chromatin remodeller
Date released
14
December, 2017
10
October, 2019
4
June, 2019
4
May, 2019
4
November, 2017
Available data
129
bam
101
bigWig
97
bed narrowPeak
72
fastq
36
bigBed narrowPeak
7
tagAlign
6
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
Organism
36
Homo sapiens
Biosample type
22
primary cell
14
in vitro differentiated cells
Organ
352
liver
94
brain
71
vasculature
69
blood vessel
64
heart
59
pancreas
54
blood
54
bodily fluid
48
limb
36
epithelium
24
kidney
24
nerve
21
artery
15
connective tissue
14
musculature of body
12
spleen
10
vein
6
adipose tissue
2
eye
Project
36
AMP
Genome assembly (visualization)
36
GRCh38
36
hg19
Lab
36
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
primary cell
endothelial cell of umbilical vein
10
kidney epithelial cell
4
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
epithelial cell of proximal tubule
2
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in vitro differentiated cells
hepatocyte
14
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