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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
22
ATAC-seq
17
DNase-seq
1
FAIRE-seq
Assay category
40
DNA accessibility
35
DNA binding
Target of assay
29
histone
29
histone modification
15
narrow histone mark
14
broad histone mark
7
RNA binding protein
7
transcription factor
chromatin remodeller
Date released
18
June, 2019
14
October, 2019
14
September, 2018
13
December, 2017
5
September, 2017
4
May, 2019
4
November, 2017
3
August, 2017
Available data
316
bam
300
bigWig
256
fastq
156
tsv
150
bed narrowPeak
80
zippedFastqFolder
75
bigBed narrowPeak
22
bed broadPeak
22
bigBed broadPeak
21
bed bed3+
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
75
Homo sapiens
Biosample type
61
primary cell
13
in vitro differentiated cells
1
cell line
Organ
335
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
75
epithelium
47
musculature of body
44
blood
44
bodily fluid
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
75
AMP
Genome assembly (visualization)
74
GRCh38
69
hg19
Lab
75
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
75 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
10
2
1
pancreatic beta cell
7
pancreatic alpha cell
6
kidney epithelial cell
4
1
pancreatic acinar cell
5
+ See 12 more…
in vitro differentiated cells
hepatocyte
13
cell line
glomerular visceral epithelial cell
1
See all biosamples
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