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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
3
MeRIP-seq
Assay category
15
DNA binding
Target of assay
79
histone
79
histone modification
41
narrow histone mark
38
broad histone mark
18
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
August, 2017
3
December, 2017
3
November, 2020
3
October, 2019
2
June, 2019
2
November, 2017
2
November, 2019
1
August, 2021
1
May, 2019
1
May, 2021
Available data
15
bam
5
fastq
2
bigWig
2
tagAlign
Organism
18
Homo sapiens
Biosample type
9
primary cell
5
cell line
4
in vitro differentiated cells
Organ
97
liver
32
pancreas
31
brain
22
vasculature
21
blood vessel
21
connective tissue
20
heart
18
adipose tissue
18
epithelium
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
3
musculature of body
2
vein
1
eye
Project
18
AMP
Genome assembly (visualization)
2
hg19
Lab
15
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
9
inconsistent ontology term
month_released!
August, 2017
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
MeRIP-seq
primary cell
endothelial cell of umbilical vein
2
epithelial cell of proximal tubule
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
hepatocyte
1
+ See 2 more…
cell line
EndoC_BH1
2
3
in vitro differentiated cells
Hepatic endoderm
2
hepatocyte
1
pancreatic PP cell
1
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