Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
22
ATAC-seq
17
DNase-seq
1
FAIRE-seq
Assay category
40
DNA accessibility
29
DNA binding
Target of assay
29
histone
29
histone modification
15
narrow histone mark
14
broad histone mark
7
RNA binding protein
transcription factor
1
chromatin remodeller
Date released
16
June, 2019
14
October, 2019
14
September, 2018
12
December, 2017
5
September, 2017
3
August, 2017
3
May, 2019
2
November, 2017
Available data
307
bam
291
bigWig
252
fastq
155
tsv
142
bed narrowPeak
80
zippedFastqFolder
69
bigBed narrowPeak
21
bed bed3+
20
bed broadPeak
20
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
6
tagAlign
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
69
Homo sapiens
Biosample type
56
primary cell
12
in vitro differentiated cells
1
cell line
Organ
124
brain
102
kidney
86
heart
84
limb
81
pancreas
78
vasculature
75
blood vessel
69
epithelium
47
musculature of body
44
liver
26
nerve
24
artery
22
connective tissue
18
ureter
13
vein
7
spleen
5
adipose tissue
5
eye
3
blood
3
bodily fluid
Project
69
AMP
Genome assembly (visualization)
68
GRCh38
63
hg19
Lab
69
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
month_released!
June, 2018
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
69 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
10
2
1
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
kidney epithelial cell
3
1
+ See 12 more…
in vitro differentiated cells
hepatocyte
12
cell line
glomerular visceral epithelial cell
1
See all biosamples
Download