Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
single cell RNA-seq
16
ATAC-seq
6
total RNA-seq
4
ChIP-seq
Assay category
39
Transcription
16
DNA accessibility
4
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
1
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
43
bam
42
bigWig
39
tsv
29
fastq
3
bed narrowPeak
3
tagAlign
Organism
59
Homo sapiens
Biosample type
33
primary cell
21
cell line
5
in vitro differentiated cells
Organ
100
pancreas
59
epithelium
4
connective tissue
3
heart
2
embryo
1
bone element
1
bone marrow
1
thymus
Project
58
AMP
1
T1D
Genome assembly (visualization)
42
GRCh38
42
hg19
Lab
59
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
BIOSAMPLE
ASSAY
59 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ATAC-seq
total RNA-seq
ChIP-seq
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
pancreatic alpha cell
3
+ See 2 more…
cell line
EndoC_BH1
16
4
1
in vitro differentiated cells
pancreatic PP cell
3
endothelial cell
1
intermediate endothelial cell
1
See all biosamples
Download