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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
single cell RNA-seq
19
ChIP-seq
Assay category
33
Transcription
19
DNA binding
Target of assay
14
histone
14
histone modification
7
broad histone mark
7
narrow histone mark
3
control
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
52
bam
49
bigWig
48
fastq
33
tsv
16
bed narrowPeak
14
bigBed narrowPeak
Organism
52
Homo sapiens
Biosample type
33
primary cell
19
in vitro differentiated cells
Organ
63
liver
52
epithelium
39
pancreas
13
embryo
2
connective tissue
Project
52
AMP
Genome assembly (visualization)
49
GRCh38
49
hg19
Lab
52
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
52 results
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single cell RNA-seq
ChIP-seq
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
pancreatic alpha cell
3
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in vitro differentiated cells
hepatocyte
15
Hepatic endoderm
4
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