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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
total RNA-seq
12
ATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
40
Transcription
12
DNA accessibility
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
38
fastq
12
bed narrowPeak
3
tsv
1
bam
1
bigWig
Organism
52
Homo sapiens
Biosample type
38
primary cell
14
tissue
1
cell line
Organ
57
pancreas
53
epithelium
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
14
connective tissue
8
bone element
8
skeleton
1
adipose tissue
1
brain
Project
37
HPAP
16
AMP
Genome assembly (visualization)
13
hg19
1
GRCh38
Lab
37
Klaus Kaestner, Upenn
16
AMP-T2D consortium
BIOSAMPLE
ASSAY
53 results
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total RNA-seq
ATAC-seq
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
primary cell
pancreatic alpha cell
27
pancreatic beta cell
10
pancreatic ductal cell
1
tissue
pigmented layer of retina
2
12
cell line
EndoC_BH1
1
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