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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
14
DNase-seq
1
ATAC-seq
1
Hi-C
1
total RNA-seq
Assay category
19
DNA binding
15
DNA accessibility
1
3D chromatin structure
1
Transcription
Target of assay
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
4
control
3
RNA binding protein
3
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
35
bam
30
bed narrowPeak
30
bigWig
18
bigBed narrowPeak
14
bed bed3+
14
bed broadPeak
14
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tsv
Organism
36
Homo sapiens
Biosample type
20
primary cell
16
cell line
Organ
81
kidney
59
pancreas
43
musculature of body
36
epithelium
35
heart
32
limb
30
brain
19
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
2
adipose tissue
2
artery
2
liver
Project
36
AMP
Genome assembly (visualization)
31
GRCh38
26
hg19
Lab
36
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
BIOSAMPLE
ASSAY
36 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
Hi-C
total RNA-seq
primary cell
epithelial cell of proximal tubule
3
1
retinal pigment epithelial cell
3
1
glomerular visceral epithelial cell
2
kidney tubule cell
2
brain microvascular endothelial cell
1
+ See 7 more…
cell line
EndoC_BH1
13
1
1
1
See all biosamples
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