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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
1
ATAC-seq
1
Hi-C
1
total RNA-seq
Assay category
19
DNA binding
1
3D chromatin structure
1
DNA accessibility
1
Transcription
Target of assay
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
4
control
3
RNA binding protein
3
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
21
bam
18
bigWig
16
bed narrowPeak
6
fastq
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
1
bedpe bed3+
1
hic
1
tsv
Organism
22
Homo sapiens
Biosample type
16
cell line
6
primary cell
Organ
315
liver
91
brain
55
pancreas
22
epithelium
6
vasculature
3
blood vessel
1
adipose tissue
1
connective tissue
Project
22
AMP
Genome assembly (visualization)
20
hg19
17
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
BIOSAMPLE
ASSAY
22 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
13
1
1
1
primary cell
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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