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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
total RNA-seq
14
DNase-seq
6
ChIP-seq
3
ATAC-seq
Assay category
17
DNA accessibility
16
Transcription
6
DNA binding
Target of assay
2
RNA binding protein
2
control
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
21
bigWig
20
bam
19
fastq
18
bed narrowPeak
18
bigBed narrowPeak
14
bed bed3+
14
bed broadPeak
14
bigBed broadPeak
Organism
39
Homo sapiens
Biosample type
39
primary cell
Organ
81
kidney
43
musculature of body
39
epithelium
35
heart
32
limb
30
brain
23
pancreas
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
20
AMP
19
HPAP
Genome assembly (visualization)
21
GRCh38
12
hg19
Lab
20
AMP-T2D consortium
19
Klaus Kaestner, Upenn
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
39 results
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Clear Filters
total RNA-seq
DNase-seq
ChIP-seq
ATAC-seq
primary cell
pancreatic alpha cell
15
2
epithelial cell of proximal tubule
1
3
retinal pigment epithelial cell
1
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
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