Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
130
total RNA-seq
109
ChIP-seq
103
ATAC-seq
70
single cell RNA-seq
47
WGBS
15
DNase-seq
6
MeRIP-seq
6
RRBS
4
Hi-C
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
RNA microarray
Assay category
4
3D chromatin structure
Date released
3
October, 2022
1
November, 2019
Available data
4
bedpe bed3+
4
hic
3
cool
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Organ
9
pancreas
8
epithelium
6
musculature of body
blood vessel
5
vasculature
4
limb
4
liver
3
brain
3
heart
2
vein
1
connective tissue
1
kidney
Project
3
HPAP
1
AMP
Genome assembly (visualization)
4
hg19
Lab
3
Klaus Kaestner, Upenn
1
AMP-T2D consortium
Audit category:
3
audit script error
1
inconsistent ontology term
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
4 results
search-icon
table-tab-icon
Clear Filters
Hi-C
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
EndoC_BH1
1
Download