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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
total RNA-seq
6
RRBS
6
WGBS
2
Hi-C
Assay category
31
Transcription
12
DNA methylation
2
3D chromatin structure
Date released
80
May, 2022
61
September, 2018
52
February, 2023
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
14
October, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
November, 2017
6
November, 2020
5
March, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
37
tsv
33
bigWig
31
bam
6
bed bedMethyl
6
bigBed bedMethyl
6
fastq
2
bed bed3+
2
hdf5
Organism
45
Homo sapiens
Biosample type
26
cell line
19
primary cell
Organ
473
connective tissue
398
adipose tissue
150
bone element
91
heart
78
vasculature
77
blood vessel
69
artery
45
epithelium
38
pancreas
19
kidney
18
brain
13
liver
11
limb
10
musculature of body
8
skeleton
2
pericardium
1
eye
Project
39
AMP
6
HPAP
Genome assembly (visualization)
39
hg19
31
GRCh38
Lab
39
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
27
inconsistent ontology term
organ_slims!
vein
BIOSAMPLE
ASSAY
45 results
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total RNA-seq
RRBS
WGBS
Hi-C
cell line
EndoC_BH1
26
primary cell
pancreatic alpha cell
6
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
brain microvascular endothelial cell
1
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