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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
Assay category
35
DNA binding
Target of assay
78
histone
78
histone modification
43
narrow histone mark
35
broad histone mark
28
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
10
September, 2018
7
December, 2017
6
August, 2017
6
November, 2019
3
October, 2019
2
May, 2019
1
August, 2021
Available data
35
bam
35
bed narrowPeak
35
bigWig
23
fastq
9
bigBed narrowPeak
1
bed bed3+
1
tagAlign
Organism
35
Homo sapiens
Biosample type
22
primary cell
7
in vitro differentiated cells
6
cell line
Organ
78
pancreas
70
brain
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
42
liver
37
heart
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
vein
4
embryo
4
spleen
Project
35
AMP
Genome assembly (visualization)
35
GRCh38
35
hg19
Lab
35
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
10
missing controlled_by
organ_slims!
vein
BIOSAMPLE
ASSAY
35 results
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ChIP-seq
primary cell
pancreatic ductal cell
6
pancreatic acinar cell
4
epithelial cell of proximal tubule
3
pancreatic alpha cell
3
pancreatic beta cell
3
+ See 2 more…
in vitro differentiated cells
hepatocyte
7
cell line
EndoC_BH1
6
See all biosamples
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