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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
529
total RNA-seq
70
single cell RNA-seq
3
small RNA-seq
Assay category
602
Transcription
202
DNA binding
131
DNA accessibility
59
DNA methylation
8
3D chromatin structure
Date released
412
February, 2021
39
February, 2023
33
April, 2018
33
July, 2018
26
September, 2018
17
July, 2019
16
September, 2020
6
May, 2021
5
December, 2019
3
August, 2018
3
October, 2019
2
February, 2020
2
March, 2020
2
October, 2018
1
June, 2018
1
May, 2023
1
November, 2019
Available data
548
tsv
544
bam
544
bigWig
147
fastq
Organism
602
Homo sapiens
Biosample type
401
tissue
165
primary cell
34
cell line
2
in vitro differentiated cells
Organ
481
connective tissue
479
pancreas
401
adipose tissue
201
epithelium
193
liver
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
547
AMP
53
HPAP
2
T1D
Genome assembly (visualization)
545
GRCh38
545
hg19
Lab
549
AMP-T2D consortium
53
Klaus Kaestner, Upenn
Audit category:
35
inconsistent ontology term
BIOSAMPLE
ASSAY
602 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue
382
subcutaneous adipose tissue
7
1
omental fat pad
5
1
visceral abdominal adipose tissue
3
pigmented layer of retina
2
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 12 more…
cell line
EndoC_BH1
33
glomerular visceral epithelial cell
1
in vitro differentiated cells
endothelial cell
1
intermediate endothelial cell
1
See all biosamples
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