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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
474
total RNA-seq
70
single cell RNA-seq
3
small RNA-seq
Assay category
547
Transcription
200
DNA binding
82
DNA accessibility
12
DNA methylation
5
3D chromatin structure
Date released
412
February, 2021
33
April, 2018
33
July, 2018
26
September, 2018
17
July, 2019
6
May, 2021
5
December, 2019
3
August, 2018
3
October, 2019
2
February, 2020
2
February, 2023
2
October, 2018
1
June, 2018
1
May, 2023
1
November, 2019
Available data
546
tsv
542
bam
542
bigWig
94
fastq
Organism
547
Homo sapiens
Biosample type
401
tissue
112
primary cell
32
cell line
2
in vitro differentiated cells
Organ
481
connective tissue
417
pancreas
401
adipose tissue
193
liver
166
heart
146
epithelium
78
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
547
AMP
53
HPAP
2
T1D
Genome assembly (visualization)
543
GRCh38
543
hg19
Lab
547
AMP-T2D consortium
Audit category:
33
inconsistent ontology term
BIOSAMPLE
ASSAY
547 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue
382
subcutaneous adipose tissue
7
1
omental fat pad
5
1
visceral abdominal adipose tissue
3
pigmented layer of retina
2
primary cell
pancreatic alpha cell
10
12
pancreatic beta cell
10
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 12 more…
cell line
EndoC_BH1
31
glomerular visceral epithelial cell
1
in vitro differentiated cells
endothelial cell
1
intermediate endothelial cell
1
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