Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
single cell RNA-seq
2
ATAC-seq
2
pCHi-C
2
total RNA-seq
1
ChIP-seq
1
Hi-C
Assay category
37
Transcription
2
DNA accessibility
1
3D chromatin structure
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
487
February, 2021
154
August, 2017
80
May, 2022
66
February, 2023
61
September, 2018
39
October, 2019
38
June, 2019
35
April, 2018
35
July, 2018
31
July, 2019
28
May, 2021
25
October, 2018
19
December, 2017
19
September, 2020
17
November, 2019
12
November, 2020
11
August, 2021
8
March, 2020
7
August, 2020
6
December, 2019
6
November, 2017
5
May, 2019
5
September, 2017
4
August, 2018
3
October, 2022
2
February, 2020
1
January, 2018
1
June, 2018
1
May, 2023
1
November, 2018
1
October, 2017
Available data
40
bigWig
40
tsv
38
bam
30
fastq
1
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
43
Homo sapiens
Biosample type
36
primary cell
5
cell line
1
stem cell
1
tissue
Organ
53
pancreas
39
epithelium
7
heart
5
musculature of body
4
blood vessel
4
connective tissue
4
vasculature
3
liver
2
brain
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
40
AMP
3
T1D
Genome assembly (visualization)
41
hg19
38
GRCh38
Lab
43
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
43 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ATAC-seq
pCHi-C
total RNA-seq
ChIP-seq
Hi-C
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
pancreatic alpha cell
3
+ See 4 more…
cell line
EndoC_BH1
2
2
1
stem cell
mesenchymal stem cell
1
tissue
adipose tissue
1
See all biosamples
Download