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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
198
total RNA-seq
70
single cell RNA-seq
Assay category
268
Transcription
164
DNA binding
138
DNA accessibility
53
DNA methylation
8
3D chromatin structure
Date released
84
February, 2021
43
February, 2023
33
April, 2018
33
July, 2018
26
September, 2018
16
September, 2020
7
October, 2019
6
May, 2021
5
December, 2019
5
July, 2019
3
August, 2018
2
March, 2020
2
October, 2018
1
February, 2020
1
June, 2018
1
November, 2019
Available data
211
tsv
208
bam
208
bigWig
147
fastq
4
txt
Organism
268
Homo sapiens
Biosample type
163
primary cell
69
tissue
34
cell line
2
in vitro differentiated cells
Organ
481
connective tissue
479
pancreas
401
adipose tissue
201
epithelium
193
liver
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
213
AMP
53
HPAP
2
T1D
Genome assembly (visualization)
208
GRCh38
208
hg19
Lab
215
AMP-T2D consortium
53
Klaus Kaestner, Upenn
Audit category:
35
inconsistent ontology term
BIOSAMPLE
ASSAY
268 results
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total RNA-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 11 more…
tissue
bone tissue
58
tibial nerve
5
pigmented layer of retina
2
acetabular part of hip bone
1
ilium
1
+ See 2 more…
cell line
EndoC_BH1
33
glomerular visceral epithelial cell
1
in vitro differentiated cells
endothelial cell
1
intermediate endothelial cell
1
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