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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
2
ChIP-seq
2
total RNA-seq
Assay category
3
3D chromatin structure
2
DNA binding
2
Transcription
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
3
March, 2020
3
October, 2022
1
May, 2021
Available data
4
bam
4
bigWig
3
bedpe bed3+
3
cool
3
hic
2
bed narrowPeak
2
tsv
Organism
7
Homo sapiens
Biosample type
4
cell line
3
primary cell
Organ
9
pancreas
7
epithelium
0
nerve
Project
AMP
4
T1D
3
HPAP
Genome assembly (visualization)
14
GRCh38
7
hg19
Lab
4
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
4
inconsistent ontology term
3
audit script error
award.project!
AMP
BIOSAMPLE
ASSAY
7 results
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Hi-C
ChIP-seq
total RNA-seq
cell line
EndoC_BH1
2
2
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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