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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
7
DNase-seq
7
total RNA-seq
2
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
59
DNA binding
10
DNA accessibility
7
Transcription
1
3D chromatin structure
Target of assay
45
histone
45
histone modification
28
broad histone mark
17
narrow histone mark
14
control
Date released
80
May, 2022
77
October, 2019
61
September, 2018
52
February, 2023
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
February, 2020
1
June, 2018
Available data
74
bam
56
bigWig
48
bed narrowPeak
40
bigBed narrowPeak
7
tsv
6
bed broadPeak
6
bigBed broadPeak
4
bed bed3+
1
hic
1
tar
Organism
77
Homo sapiens
Biosample type
42
tissue
33
primary cell
2
cell line
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
77
AMP
Genome assembly (visualization)
58
hg19
54
GRCh38
Lab
77
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
FAIRE-seq
Hi-C
tissue
tibial nerve
35
2
4
1
primary cell
endothelial cell of umbilical vein
17
2
1
1
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
Liver fetal (hepatocyte)
1
cell line
glomerular visceral epithelial cell
1
1
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