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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
7
total RNA-seq
3
DNase-seq
2
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
57
DNA binding
7
Transcription
6
DNA accessibility
1
3D chromatin structure
Target of assay
43
histone
43
histone modification
26
broad histone mark
17
narrow histone mark
14
control
Date released
80
May, 2022
71
October, 2019
61
September, 2018
52
February, 2023
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
June, 2019
6
March, 2020
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
November, 2017
2
October, 2018
1
February, 2020
1
June, 2018
Available data
74
bam
56
bigWig
48
bed narrowPeak
40
bigBed narrowPeak
7
tsv
6
bed broadPeak
bigBed broadPeak
4
bed bed3+
1
hic
1
tar
Organism
71
Homo sapiens
Biosample type
40
tissue
29
primary cell
2
cell line
Organ
86
brain
65
limb
41
blood vessel
41
vasculature
40
nerve
31
epithelium
30
kidney
24
artery
21
eye
17
pancreas
17
vein
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
71
AMP
Genome assembly (visualization)
52
hg19
50
GRCh38
Lab
71
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
71 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
FAIRE-seq
Hi-C
tissue
tibial nerve
35
4
1
primary cell
endothelial cell of umbilical vein
15
1
1
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
Liver fetal (hepatocyte)
1
cell line
glomerular visceral epithelial cell
1
1
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