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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
Assay category
117
DNA binding
Target of assay
117
histone
117
histone modification
60
broad histone mark
57
narrow histone mark
41
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
45
October, 2019
21
September, 2018
14
August, 2017
14
December, 2017
10
November, 2019
3
August, 2021
3
May, 2019
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
Available data
117
bam
114
bigWig
112
bed narrowPeak
53
bigBed narrowPeak
51
fastq
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
3
bed bed3+
Organism
117
Homo sapiens
Biosample type
66
primary cell
24
tissue
15
in vitro differentiated cells
12
cell line
Organ
187
brain
151
pancreas
102
liver
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
62
heart
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
115
AMP
2
T1D
Genome assembly (visualization)
114
hg19
112
GRCh38
Lab
117
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
BIOSAMPLE
ASSAY
117 results
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Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
15
pancreatic ductal cell
13
pancreatic acinar cell
8
epithelial cell of proximal tubule
7
pancreatic alpha cell
7
+ See 6 more…
tissue
tibial nerve
24
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
12
See all biosamples
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