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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
Assay category
18
DNA binding
Target of assay
94
histone
94
histone modification
60
transcription factor
50
narrow histone mark
44
broad histone mark
36
control
18
RNA binding protein
11
chromatin remodeller
3
nucleotide modification
Date released
6
January, 2019
2
December, 2017
2
December, 2018
2
June, 2019
2
November, 2017
2
November, 2018
1
May, 2019
1
November, 2019
Available data
18
bam
18
bed narrowPeak
18
bigWig
17
bigBed narrowPeak
14
fastq
2
bed broadPeak
2
bigBed broadPeak
Organism
18
Homo sapiens
Biosample type
11
cell line
5
primary cell
2
in vitro differentiated cells
Organ
58
liver
10
blood
10
bodily fluid
10
connective tissue
9
pancreas
8
epithelium
6
heart
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
3
kidney
1
artery
1
eye
Project
18
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
18
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
cell line
GM12878
10
EndoC_BH1
1
primary cell
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
retinal pigment epithelial cell
1
in vitro differentiated cells
hepatocyte
2
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