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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
ATAC-seq
24
total RNA-seq
4
pCHi-C
1
RRBS
Assay category
40
DNA binding
24
Transcription
1
DNA methylation
Target of assay
27
histone
27
histone modification
16
broad histone mark
12
control
11
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
59
October, 2019
4
February, 2023
3
June, 2019
2
February, 2020
1
July, 2019
Available data
48
bam
36
bigWig
32
bed narrowPeak
32
bigBed narrowPeak
10
tsv
6
bed bed3+
bed broadPeak
6
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
69
Homo sapiens
Biosample type
65
tissue
4
primary cell
Organ
775
pancreas
705
liver
649
connective tissue
482
adipose tissue
399
epithelium
316
heart
235
brain
201
kidney
173
vasculature
171
blood vessel
147
bone element
92
artery
78
limb
68
blood
68
bodily fluid
49
musculature of body
40
nerve
37
embryo
29
eye
23
spleen
20
lung
18
vein
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
69
AMP
Genome assembly (visualization)
31
hg19
30
GRCh38
Lab
69
AMP-T2D consortium
assay_title!
ATAC-seq
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
69 results
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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
RRBS
tissue
tibial nerve
35
5
islet of Langerhans
2
14
4
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
3
1
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