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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
1
DNA methylation
Date released
31
February, 2023
19
October, 2019
1
February, 2020
1
July, 2019
Available data
31
bed narrowPeak
5
tsv
4
bam
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
bigBed narrowPeak
4
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
51
tissue
1
primary cell
Organ
696
pancreas
518
connective tissue
414
adipose tissue
355
epithelium
233
liver
229
heart
222
kidney
159
bone element
122
vasculature
121
blood vessel
103
artery
52
eye
35
brain
24
musculature of body
20
limb
20
lung
16
skeleton
15
embryo
9
blood
9
bodily fluid
6
nerve
4
spleen
2
intestine
2
pericardium
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
52
AMP
Genome assembly (visualization)
28
hg19
Lab
52
AMP-T2D consortium
assay_title!
ChIP-seq
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
52 results
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ATAC-seq
total RNA-seq
pCHi-C
RRBS
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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