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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
1
DNA methylation
Date released
31
February, 2023
19
October, 2019
1
February, 2020
1
July, 2019
Available data
31
bed narrowPeak
5
tsv
4
bam
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
51
tissue
1
primary cell
Organ
266
pancreas
210
kidney
195
epithelium
149
heart
101
bone element
58
vasculature
57
blood vessel
52
eye
49
liver
47
artery
36
connective tissue
20
lung
18
brain
16
musculature of body
16
skeleton
13
limb
12
adipose tissue
8
blood
8
bodily fluid
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
52
AMP
Genome assembly (visualization)
28
hg19
Lab
52
AMP-T2D consortium
assay_title!
ChIP-seq
files.file_type!
bigWig
BIOSAMPLE
ASSAY
52 results
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ATAC-seq
total RNA-seq
pCHi-C
RRBS
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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