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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
81
total RNA-seq
40
ATAC-seq
ChIP-seq
5
pCHi-C
4
DNase-seq
1
RRBS
Assay category
81
Transcription
44
DNA accessibility
1
DNA methylation
Date released
150
February, 2021
39
February, 2023
19
October, 2019
4
June, 2019
1
February, 2020
1
July, 2019
1
May, 2021
Available data
88
txt
70
bam
63
tsv
62
bigWig
39
bed narrowPeak
4
bed bed3
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
215
Homo sapiens
Biosample type
212
tissue
3
primary cell
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
214
AMP
1
T1D
Genome assembly (visualization)
102
hg19
70
GRCh38
Lab
214
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
215 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
DNase-seq
RRBS
tissue
bone element
84
bone tissue
58
retina
3
15
3
islet of Langerhans
14
1
4
pigmented layer of retina
2
12
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primary cell
retinal pigment epithelial cell
1
1
megakaryocyte
1
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