Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
total RNA-seq
5
ChIP-seq
4
DNase-seq
pCHi-C
1
RRBS
Assay category
32
DNA accessibility
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
7
June, 2019
3
October, 2019
1
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
38
Homo sapiens
Biosample type
33
tissue
5
primary cell
Organ
599
liver
542
pancreas
393
epithelium
292
kidney
278
heart
267
brain
205
connective tissue
174
vasculature
168
blood vessel
115
limb
96
bone element
91
adipose tissue
89
musculature of body
85
artery
69
blood
69
bodily fluid
38
eye
38
nerve
24
spleen
23
embryo
22
vein
19
lung
18
ureter
12
skeleton
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
pericardium
1
skin of body
Project
38
AMP
Genome assembly (visualization)
34
hg19
6
GRCh38
Lab
38
AMP-T2D consortium
assay_title!
total RNA-seq
pCHi-C
BIOSAMPLE
ASSAY
38 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
RRBS
tissue
retina
15
3
pigmented layer of retina
12
islet of Langerhans
1
2
primary cell
retinal pigment epithelial cell
3
1
1
Download