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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
5
ChIP-seq
4
DNase-seq
4
pCHi-C
1
ATAC-seq
1
RRBS
Assay category
5
DNA accessibility
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
February, 2023
7
June, 2019
7
October, 2019
1
July, 2019
Available data
7
bam
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
15
Homo sapiens
Biosample type
10
tissue
5
primary cell
Organ
602
liver
529
pancreas
380
epithelium
294
kidney
268
brain
245
heart
200
connective tissue
140
vasculature
134
blood vessel
115
limb
93
bone element
92
adipose tissue
90
musculature of body
69
blood
69
bodily fluid
50
artery
38
nerve
25
spleen
23
embryo
22
vein
20
lung
18
ureter
15
eye
8
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
15
AMP
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
15
AMP-T2D consortium
assay_title!
total RNA-seq
month_released!
February, 2023
BIOSAMPLE
ASSAY
15 results
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Clear Filters
ChIP-seq
DNase-seq
pCHi-C
ATAC-seq
RRBS
tissue
islet of Langerhans
2
4
1
retina
3
primary cell
retinal pigment epithelial cell
3
1
1
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