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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
total RNA-seq
4
ChIP-seq
4
DNase-seq
4
pCHi-C
1
RRBS
Assay category
32
DNA accessibility
4
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
transcription factor
Date released
27
February, 2023
7
October, 2019
6
June, 2019
1
July, 2019
Available data
32
bed narrowPeak
6
bam
5
bigBed narrowPeak
5
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
41
Homo sapiens
Biosample type
37
tissue
4
primary cell
Organ
524
pancreas
384
epithelium
284
kidney
269
heart
266
brain
264
liver
170
connective tissue
166
vasculature
161
blood vessel
115
limb
97
bone element
90
musculature of body
80
artery
76
adipose tissue
41
eye
38
nerve
22
vein
20
embryo
20
lung
19
spleen
18
blood
18
bodily fluid
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
41
AMP
Genome assembly (visualization)
33
hg19
5
GRCh38
Lab
41
AMP-T2D consortium
assay_title!
total RNA-seq
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
pCHi-C
RRBS
tissue
retina
15
3
pigmented layer of retina
12
islet of Langerhans
1
2
4
primary cell
retinal pigment epithelial cell
2
1
1
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