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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
pCHi-C
3
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
3
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
31
February, 2023
17
October, 2019
1
February, 2020
1
July, 2019
1
June, 2019
Available data
27
bed narrowPeak
5
tsv
1
bam
1
bed bedMethyl
1
bigBed bedMethyl
Organism
51
Homo sapiens
Biosample type
49
tissue
2
primary cell
Organ
310
pancreas
257
liver
230
epithelium
147
kidney
124
heart
113
connective tissue
92
bone element
67
brain
65
adipose tissue
51
eye
44
vasculature
42
blood vessel
42
musculature of body
26
limb
19
lung
15
blood
15
bodily fluid
13
artery
12
nerve
10
vein
8
embryo
8
skeleton
8
spleen
4
gonad
4
ovary
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
Project
51
AMP
Genome assembly (visualization)
34
hg19
GRCh38
Lab
51
AMP-T2D consortium
assembly!
GRCh38
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
51 results
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ATAC-seq
total RNA-seq
ChIP-seq
RRBS
tissue
retina
15
3
islet of Langerhans
1
14
2
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
1
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