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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
18
total RNA-seq
5
ChIP-seq
4
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
18
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
31
February, 2023
21
October, 2019
3
June, 2019
February, 2020
1
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
56
Homo sapiens
Biosample type
52
tissue
4
primary cell
Organ
916
pancreas
777
liver
655
connective tissue
503
epithelium
483
adipose tissue
320
heart
276
kidney
239
brain
220
vasculature
216
blood vessel
159
bone element
135
artery
83
limb
69
blood
69
bodily fluid
60
musculature of body
56
eye
40
nerve
34
embryo
24
spleen
20
lung
20
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
56
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
56
AMP-T2D consortium
files.file_type!
bed bed3+
month_released!
February, 2020
BIOSAMPLE
ASSAY
56 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
pCHi-C
RRBS
tissue
islet of Langerhans
1
14
2
4
retina
15
2
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
3
1
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