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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
4
pCHi-C
3
ChIP-seq
1
ATAC-seq
Assay category
19
Transcription
3
DNA binding
1
DNA accessibility
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
21
October, 2019
4
February, 2023
1
February, 2020
1
June, 2019
Available data
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
bigBed bedMethyl
Organism
27
Homo sapiens
Biosample type
26
tissue
1
primary cell
Organ
726
pancreas
606
connective tissue
476
adipose tissue
367
epithelium
347
liver
194
heart
167
kidney
151
bone element
101
vasculature
100
blood vessel
81
brain
67
artery
32
musculature of body
29
limb
27
eye
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
9
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
27
AMP
Lab
27
AMP-T2D consortium
files.file_type!
bigBed bedMethyl
bed narrowPeak
BIOSAMPLE
ASSAY
27 results
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total RNA-seq
pCHi-C
ChIP-seq
ATAC-seq
tissue
islet of Langerhans
14
4
2
1
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
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