Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
5
total RNA-seq
4
DNase-seq
3
ChIP-seq
Assay category
31
DNA accessibility
5
Transcription
3
DNA binding
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
31
February, 2023
October, 2019
7
June, 2019
1
February, 2020
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
bigBed bedMethyl
Organism
39
Homo sapiens
Biosample type
35
tissue
4
primary cell
Organ
922
pancreas
781
liver
677
connective tissue
488
adipose tissue
483
epithelium
337
heart
320
kidney
198
brain
187
vasculature
182
blood vessel
159
bone element
115
artery
92
musculature of body
69
blood
69
bodily fluid
52
limb
39
eye
37
embryo
23
spleen
20
lung
18
ureter
16
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
39
AMP
Genome assembly (visualization)
33
hg19
6
GRCh38
Lab
39
AMP-T2D consortium
files.file_type!
bigBed bedMethyl
month_released!
October, 2019
BIOSAMPLE
ASSAY
39 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
DNase-seq
ChIP-seq
tissue
retina
15
3
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
3
Download