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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
5
ChIP-seq
4
pCHi-C
1
ATAC-seq
1
RRBS
Assay category
15
Transcription
5
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
February, 2023
21
October, 2019
3
June, 2019
1
February, 2020
1
July, 2019
Available data
7
bam
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
26
Homo sapiens
Biosample type
22
tissue
4
primary cell
Organ
883
pancreas
728
liver
661
connective tissue
488
adipose tissue
450
epithelium
327
heart
276
kidney
247
brain
184
vasculature
182
blood vessel
151
bone element
102
artery
86
limb
69
blood
69
bodily fluid
63
musculature of body
41
nerve
37
embryo
26
eye
24
spleen
20
lung
18
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
26
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
26
AMP-T2D consortium
files.file_type!
bigBed broadPeak
month_released!
February, 2023
BIOSAMPLE
ASSAY
26 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
ATAC-seq
RRBS
tissue
islet of Langerhans
14
2
4
1
retina
1
primary cell
retinal pigment epithelial cell
3
1
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