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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
5
total RNA-seq
3
ChIP-seq
1
RRBS
Assay category
27
DNA accessibility
5
Transcription
3
DNA binding
1
DNA methylation
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
31
February, 2023
October, 2019
3
June, 2019
1
February, 2020
1
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
36
Homo sapiens
Biosample type
32
tissue
4
primary cell
Organ
922
pancreas
721
liver
671
connective tissue
488
adipose tissue
471
epithelium
355
heart
246
kidney
178
vasculature
176
blood vessel
162
brain
159
bone element
113
artery
69
blood
69
bodily fluid
63
musculature of body
37
embryo
36
eye
24
spleen
21
limb
20
lung
16
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
36
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
36
AMP-T2D consortium
files.file_type!
bigBed broadPeak
month_released!
October, 2019
BIOSAMPLE
ASSAY
36 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
RRBS
tissue
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
3
1
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