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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
4
DNase-seq
3
ChIP-seq
Assay category
5
Transcription
4
DNA accessibility
3
DNA binding
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
7
June, 2019
4
February, 2023
1
February, 2020
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
12
Homo sapiens
Biosample type
8
tissue
4
primary cell
Organ
700
pancreas
693
liver
597
connective tissue
445
adipose tissue
327
epithelium
309
heart
257
brain
195
vasculature
190
blood vessel
156
kidney
117
limb
106
artery
66
bone element
60
blood
60
bodily fluid
60
musculature of body
43
nerve
36
embryo
25
spleen
20
vein
18
ureter
12
eye
8
skeleton
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
12
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
12
AMP-T2D consortium
BIOSAMPLE
ASSAY
12 results
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total RNA-seq
DNase-seq
ChIP-seq
tissue
retina
3
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
3
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