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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
34
DNase-seq
Assay category
66
DNA binding
34
DNA accessibility
Target of assay
57
histone
57
histone modification
34
broad histone mark
23
narrow histone mark
9
transcription factor
7
RNA binding protein
Date released
46
April, 2019
39
June, 2019
15
May, 2019
Available data
218
bam
190
bigWig
184
bed narrowPeak
173
tsv
100
bigBed narrowPeak
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
9
bed bedMethyl
9
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
100
Homo sapiens
Biosample type
91
tissue
9
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
100
AMP
Genome assembly (visualization)
100
GRCh38
97
hg19
Lab
100
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
100 results
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ChIP-seq
DNase-seq
tissue
heart left ventricle
28
3
heart
7
18
heart right ventricle
11
1
right atrium auricular region
7
2
coronary artery
3
2
+ See 3 more…
primary cell
cardiac fibroblast
3
3
retinal pigment epithelial cell
2
1
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