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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
18
total RNA-seq
4
pCHi-C
3
DNase-seq
2
ChIP-seq
Assay category
31
DNA accessibility
18
Transcription
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
21
October, 2019
3
June, 2019
February, 2020
Available data
30
bed narrowPeak
4
tsv
3
bam
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
Organism
55
Homo sapiens
Biosample type
55
tissue
primary cell
Organ
776
liver
643
connective tissue
599
pancreas
487
adipose tissue
337
heart
318
kidney
253
brain
196
blood vessel
196
vasculature
158
bone element
137
artery
119
limb
118
epithelium
80
musculature of body
61
blood
61
bodily fluid
55
eye
42
nerve
37
embryo
25
spleen
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
55
AMP
Genome assembly (visualization)
30
hg19
3
GRCh38
Lab
55
AMP-T2D consortium
month_released!
February, 2020
biosample_type!
primary cell
BIOSAMPLE
ASSAY
55 results
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ATAC-seq
total RNA-seq
pCHi-C
DNase-seq
ChIP-seq
tissue
islet of Langerhans
1
14
4
2
retina
15
2
3
pigmented layer of retina
12
2
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