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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
total RNA-seq
4
pCHi-C
3
ChIP-seq
1
ATAC-seq
1
RRBS
Assay category
18
Transcription
3
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
21
October, 2019
4
February, 2023
February, 2020
1
July, 2019
1
June, 2019
Available data
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
27
Homo sapiens
Biosample type
25
tissue
2
primary cell
Organ
731
pancreas
607
connective tissue
476
adipose tissue
373
epithelium
349
liver
199
heart
171
kidney
151
bone element
100
vasculature
98
blood vessel
71
brain
65
artery
34
musculature of body
27
eye
27
limb
23
embryo
20
lung
15
blood
15
bodily fluid
15
nerve
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
27
AMP
Genome assembly (visualization)
1
hg19
Lab
27
AMP-T2D consortium
month_released!
February, 2020
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
27 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
ATAC-seq
RRBS
tissue
islet of Langerhans
14
4
2
1
pigmented layer of retina
2
retina
2
primary cell
retinal pigment epithelial cell
1
1
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