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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
18
total RNA-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
18
Transcription
2
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
21
October, 2019
June, 2019
February, 2020
1
July, 2019
Available data
27
bed narrowPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
53
Homo sapiens
Biosample type
52
tissue
1
primary cell
Organ
941
pancreas
788
liver
664
connective tissue
504
epithelium
488
adipose tissue
315
heart
273
kidney
244
brain
226
vasculature
222
blood vessel
159
bone element
137
artery
87
limb
69
blood
69
bodily fluid
53
eye
51
musculature of body
42
nerve
37
embryo
25
spleen
22
vein
20
lung
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
53
AMP
Genome assembly (visualization)
28
hg19
Lab
53
AMP-T2D consortium
month_released!
February, 2020
June, 2019
BIOSAMPLE
ASSAY
53 results
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ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
2
retina
15
2
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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