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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
5
ChIP-seq
4
DNase-seq
4
pCHi-C
1
ATAC-seq
Assay category
15
Transcription
5
DNA accessibility
5
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
February, 2023
21
October, 2019
7
June, 2019
1
February, 2020
July, 2019
Available data
7
bam
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
tsv
Organism
29
Homo sapiens
Biosample type
25
tissue
4
primary cell
Organ
884
pancreas
781
liver
652
connective tissue
478
adipose tissue
459
epithelium
343
kidney
292
heart
267
brain
189
vasculature
184
blood vessel
151
bone element
117
limb
103
artery
86
musculature of body
69
blood
69
bodily fluid
43
nerve
37
embryo
29
eye
25
spleen
22
vein
20
lung
18
ureter
8
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
29
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
29
AMP-T2D consortium
month_released!
July, 2019
February, 2023
BIOSAMPLE
ASSAY
29 results
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Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
pCHi-C
ATAC-seq
tissue
islet of Langerhans
14
2
4
1
retina
1
3
primary cell
retinal pigment epithelial cell
3
1
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