Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ATAC-seq
61
total RNA-seq
14
ChIP-seq
6
DNase-seq
2
single cell RNA-seq
1
RRBS
Assay category
77
DNA accessibility
63
Transcription
14
DNA binding
1
DNA methylation
Target of assay
6
transcription factor
5
control
3
histone
3
histone modification
3
narrow histone mark
2
RNA binding protein
Date released
66
February, 2021
66
February, 2023
October, 2019
9
June, 2019
5
May, 2019
4
July, 2019
3
February, 2020
2
August, 2021
Available data
86
bed narrowPeak
83
bam
70
bigWig
63
tsv
11
bigBed narrowPeak
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
6
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
155
Homo sapiens
Biosample type
82
tissue
66
cell line
7
primary cell
Organ
928
pancreas
784
liver
680
connective tissue
490
adipose tissue
489
epithelium
345
heart
324
kidney
200
brain
189
vasculature
183
blood vessel
159
bone element
115
artery
96
musculature of body
69
blood
69
bodily fluid
53
limb
40
eye
37
embryo
25
spleen
20
lung
18
ureter
16
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
155
AMP
Genome assembly (visualization)
113
GRCh38
106
hg19
Lab
155
AMP-T2D consortium
month_released!
October, 2019
BIOSAMPLE
ASSAY
155 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
DNase-seq
single cell RNA-seq
RRBS
tissue
coronary artery
36
1
5
2
retina
15
3
3
pigmented layer of retina
12
2
pulmonary artery
2
tibial artery
1
cell line
smooth muscle cell of the coronary artery
8
52
6
primary cell
retinal pigment epithelial cell
3
1
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download